close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP5Ubiquitin carboxyl-terminal hydrolase 5 isoform X1. (855 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.948
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.931
ENSPMJP00000027002
Ubiquitin.
    
 0.898
USP10
Ubiquitin carboxyl-terminal hydrolase 10.
     
 0.764
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.762
OASL
2'-5'-oligoadenylate synthase-like protein.
    
 0.759
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
 
 0.722
UFD1
Ubiquitin fusion degradation protein 1 homolog isoform X1.
    
 0.687
BECN1
Beclin-1.
     
 0.645
SKP2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
    
 0.636
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.