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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107213149DEP domain-containing mTOR-interacting protein-like isoform X1. (424 aa)    
Predicted Functional Partners:
MTOR
Serine/threonine-protein kinase mTOR isoform X1.
    
 0.987
MLST8
Target of rapamycin complex subunit LST8.
    
 0.966
RHEB
GTP-binding protein Rheb isoform X1.
    
 0.929
ATG13
Autophagy-related protein 13 isoform X1.
     
 0.928
RPS6KB2
Ribosomal protein S6 kinase beta-2 isoform X1.
    
 0.920
RPS6KB1
Ribosomal protein S6 kinase beta-1.
    
 0.920
RRAGB
Ras-related GTP-binding protein A/B.
     
 0.914
ULK1
Serine/threonine-protein kinase ULK1 isoform X1.
    
 0.912
ULK2
Serine/threonine-protein kinase ULK2.
    
 0.907
RRAGD
Ras-related GTP-binding protein D isoform X2.
     
 0.906
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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