Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
B2MBeta-2-microglobulin. (120 aa)    
Predicted Functional Partners:
ENSPMJP00000004421
Class I histocompatibility antigen, F10 alpha chain-like.
   
 0.985
ENSPMJP00000005052
Class I histocompatibility antigen, F10 alpha chain.
   
 0.985
RPA3
Replication protein A 14 kDa subunit.
   
 0.960
RPA1
Replication protein A 70 kDa DNA-binding subunit.
   
 0.956
ENSPMJP00000004816
T-cell surface glycoprotein CD1b-3-like.
    
 0.951
CD8A
T-cell surface glycoprotein CD8 alpha chain isoform X1.
   
 0.934
WRN
Werner syndrome ATP-dependent helicase isoform X1.
   
 0.891
DNA2
DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1.
   
 0.885
MCM4
DNA replication licensing factor MCM4.
   
 0.880
RAD52
DNA repair protein RAD52 homolog isoform X1.
    
 0.878
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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