Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AP3B2AP-3 complex subunit beta-2. (1100 aa)    
Predicted Functional Partners:
AP3D1
AP-3 complex subunit delta-1 isoform X1.
   
 0.984
AP3S1
AP-3 complex subunit sigma-1 isoform X1.
    
 0.978
AP3S2
AP-3 complex subunit sigma-2 isoform X1.
    
 0.978
AP3M1
AP-3 complex subunit mu-1.
   
 0.971
AP3M2
AP-3 complex subunit mu-2.
   
 0.971
AP3B1
AP-3 complex subunit beta-1 isoform X1.
  
  
 
0.901
ENSPMJP00000013950
annotation not available
   
 0.856
AP1G1
AP-1 complex subunit gamma-1 isoform X1.
   
 0.754
DTNBP1
Dysbindin.
    
 0.753
ENSPMJP00000006487
annotation not available
    
 0.697
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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