STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107210680Ankyrin repeat and KH domain-containing protein 1. (2506 aa)    
Predicted Functional Partners:
FGF8
Fibroblast growth factor 8 isoform X2.
    
   0.674
PRRC2C
Protein PRRC2C isoform X1.
   
 
 0.660
MX1
Interferon-induced GTP-binding protein Mx-like isoform X1.
    
 0.559
NUDC
Nuclear migration protein nudC.
    
 0.519
SEC24B
Protein transport protein Sec24B isoform X1.
    
 0.505
USP34
Ubiquitin carboxyl-terminal hydrolase 34 isoform X1.
   
 0.505
CLRN3
Clarin-3.
    
 
 0.493
ZFP91
ZFP91 zinc finger protein.
    
 0.473
PDCD2L
Programmed cell death protein 2-like.
    
   0.454
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
    
   0.454
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.