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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP1LC3CMicrotubule-associated proteins 1A/1B light chain 3C. (137 aa)    
Predicted Functional Partners:
NBR1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.995
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A isoform X1.
  
  
 
0.940
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
  
  
 
0.940
ATG3
Ubiquitin-like-conjugating enzyme ATG3.
   
 0.892
ATG7
Ubiquitin-like modifier-activating enzyme ATG7 isoform X5.
   
 0.877
ATG4B
Cysteine protease ATG4B isoform X1.
   
 0.862
MIB2
E3 ubiquitin-protein ligase MIB2 isoform X1.
   
 0.789
ATG4A
Autophagy related 4A cysteine peptidase.
   
 0.788
ATG12
Ubiquitin-like protein ATG12.
   
 0.781
ATG4C
Cysteine protease ATG4C isoform X1.
   
 0.776
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.