Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SASH1SAM and SH3 domain-containing protein 1 isoform X4. (1225 aa)    
Predicted Functional Partners:
SAMD5
Sterile alpha motif domain containing 5.
 
    
 0.815
TRMT11
TRNA (guanine(10)-N2)-methyltransferase homolog isoform X1.
      
 0.693
FICD
Adenosine monophosphate-protein transferase FICD.
      
 0.677
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1.
   
 0.625
MTRF1L
Peptide chain release factor 1-like, mitochondrial isoform X1.
      
 0.603
MAMDC2
MAM domain-containing protein 2 isoform X1.
      
 0.540
DNAJB13
DnaJ homolog subfamily B member 13 isoform X1.
      
 0.517
DNAJB4
DnaJ homolog subfamily B member 4.
      
 0.517
ITPK1
Inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase.
     
 0.499
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1.
      
 0.484
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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