Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ASXL2Putative Polycomb group protein ASXL2. (1176 aa)    
Predicted Functional Partners:
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1.
   
 0.996
KDM1B
Lysine-specific histone demethylase 1B.
    
 0.981
MBD5
Methyl-CpG-binding domain protein 5.
   
 0.953
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1.
   
 0.935
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5.
   
 0.929
ASXL1
Putative Polycomb group protein ASXL1 isoform X1.
   
0.909
ASXL3
Putative Polycomb group protein ASXL3 isoform X1.
   
0.909
HCFC2
Host cell factor 2 isoform X1.
    
 0.905
FOXK2
Forkhead box protein K2.
    
 0.902
FOXK1
Forkhead box protein K1.
    
 0.895
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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