SIL1 protein (Parus major) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SIL1

Nucleotide exchange factor SIL1-like. (318 aa)

Predicted Functional Partners:

RPL23A

0.991

RPL5

0.989

RPL11

0.983

RPL23

0.983

RPL35

0.983

MRPS7

0.982

RPS3

0.982

RPS11

0.982

MRPS9

0.982

RPS15

0.982

Your Current Organism:

Parus major

NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRPS7	MRPS9	ENSPMJP00000000621	ENSPMJP00000015346	28S ribosomal protein S7, mitochondrial.	28S ribosomal protein S9, mitochondrial isoform X1.	0.999
MRPS7	RPL11	ENSPMJP00000000621	ENSPMJP00000000896	28S ribosomal protein S7, mitochondrial.	Large subunit ribosomal protein L11e.	0.999
MRPS7	RPL23	ENSPMJP00000000621	ENSPMJP00000002390	28S ribosomal protein S7, mitochondrial.	Large subunit ribosomal protein L23e.	0.999
MRPS7	RPL23A	ENSPMJP00000000621	ENSPMJP00000026078	28S ribosomal protein S7, mitochondrial.	Large subunit ribosomal protein L23Ae.	0.999
MRPS7	RPL35	ENSPMJP00000000621	ENSPMJP00000026218	28S ribosomal protein S7, mitochondrial.	Large subunit ribosomal protein L35e.	0.999
MRPS7	RPL5	ENSPMJP00000000621	ENSPMJP00000026555	28S ribosomal protein S7, mitochondrial.	Large subunit ribosomal protein L5e.	0.999
MRPS7	RPS11	ENSPMJP00000000621	ENSPMJP00000006556	28S ribosomal protein S7, mitochondrial.	Small subunit ribosomal protein S11e.	0.999
MRPS7	RPS15	ENSPMJP00000000621	ENSPMJP00000015391	28S ribosomal protein S7, mitochondrial.	Small subunit ribosomal protein S15e.	0.999
MRPS7	RPS3	ENSPMJP00000000621	ENSPMJP00000001306	28S ribosomal protein S7, mitochondrial.	Small subunit ribosomal protein S3e.	0.999
MRPS7	SIL1	ENSPMJP00000000621	ENSPMJP00000009318	28S ribosomal protein S7, mitochondrial.	Nucleotide exchange factor SIL1-like.	0.982
MRPS9	MRPS7	ENSPMJP00000015346	ENSPMJP00000000621	28S ribosomal protein S9, mitochondrial isoform X1.	28S ribosomal protein S7, mitochondrial.	0.999
MRPS9	RPL11	ENSPMJP00000015346	ENSPMJP00000000896	28S ribosomal protein S9, mitochondrial isoform X1.	Large subunit ribosomal protein L11e.	0.999
MRPS9	RPL23	ENSPMJP00000015346	ENSPMJP00000002390	28S ribosomal protein S9, mitochondrial isoform X1.	Large subunit ribosomal protein L23e.	0.999
MRPS9	RPL23A	ENSPMJP00000015346	ENSPMJP00000026078	28S ribosomal protein S9, mitochondrial isoform X1.	Large subunit ribosomal protein L23Ae.	0.999
MRPS9	RPL35	ENSPMJP00000015346	ENSPMJP00000026218	28S ribosomal protein S9, mitochondrial isoform X1.	Large subunit ribosomal protein L35e.	0.999
MRPS9	RPL5	ENSPMJP00000015346	ENSPMJP00000026555	28S ribosomal protein S9, mitochondrial isoform X1.	Large subunit ribosomal protein L5e.	0.999
MRPS9	RPS11	ENSPMJP00000015346	ENSPMJP00000006556	28S ribosomal protein S9, mitochondrial isoform X1.	Small subunit ribosomal protein S11e.	0.999
MRPS9	RPS15	ENSPMJP00000015346	ENSPMJP00000015391	28S ribosomal protein S9, mitochondrial isoform X1.	Small subunit ribosomal protein S15e.	0.999
MRPS9	RPS3	ENSPMJP00000015346	ENSPMJP00000001306	28S ribosomal protein S9, mitochondrial isoform X1.	Small subunit ribosomal protein S3e.	0.999
MRPS9	SIL1	ENSPMJP00000015346	ENSPMJP00000009318	28S ribosomal protein S9, mitochondrial isoform X1.	Nucleotide exchange factor SIL1-like.	0.982