STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN2SUN domain-containing protein 2 isoform X1. (712 aa)    
Predicted Functional Partners:
CCDC155
Protein KASH5 isoform X1.
    
 
 0.902
SYNE2
Nesprin-2 isoform X1.
    
 0.893
SYNE3
Nesprin-3 isoform X1.
    
 
 0.863
SUN1
SUN domain-containing protein 1 isoform X1.
     
0.822
ENSPMJP00000011649
annotation not available
    
 0.773
ENSPMJP00000011671
Nesprin-1-like.
    
 0.773
CEP120
Centrosomal protein of 120 kDa isoform X1.
    
 
 0.710
NUDC
Nuclear migration protein nudC.
      
 0.690
LMNB2
Lamin-B2.
    
 0.590
LMNA
Lamin A/C.
    
 0.583
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.