STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD74HLA class II histocompatibility antigen gamma chain isoform X1. (364 aa)    
Predicted Functional Partners:
RPS3
Small subunit ribosomal protein S3e.
  
 0.992
ENSPMJP00000004945
annotation not available
  
 0.991
ENSPMJP00000005540
annotation not available
   
 0.991
RPS11
Small subunit ribosomal protein S11e.
  
 0.991
RPS7
Small subunit ribosomal protein S7e.
   
 0.991
RPS15
Small subunit ribosomal protein S15e.
  
 0.991
RPS16
Small subunit ribosomal protein S16e.
  
 0.991
RPS2
Small subunit ribosomal protein S2e.
  
 0.991
RPS24
40S ribosomal protein S24 isoform X1.
   
 0.990
RPS28
Ribosomal protein S28.
   
 0.990
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.