STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP5F1EF-type H+-transporting ATPase subunit epsilon. (56 aa)    
Predicted Functional Partners:
ATP5PD
F-type H+-transporting ATPase subunit d.
   
 0.999
ATP5ME
F-type H+-transporting ATPase subunit e.
   
 0.999
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
   
 0.999
ATP5MG
F-type H+-transporting ATPase subunit g.
   
 0.999
ATP5F1D
F-type H+-transporting ATPase subunit delta.
   
 0.999
ATP5F1C
ATP synthase subunit gamma, mitochondrial isoform X1.
   
 0.998
ATP5PO
F-type H+-transporting ATPase subunit O.
   
 0.998
ATP5PB
ATP synthase F(0) complex subunit B1, mitochondrial.
   
 0.997
ATP5PF
ATP synthase-coupling factor 6, mitochondrial.
   
 0.996
ATP6
ATP synthase subunit a.
    
 0.995
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.