STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC30Coiled-coil domain-containing protein 30 isoform X3. (887 aa)    
Predicted Functional Partners:
PANK4
Bifunctional protein PANK4.
     
 0.936
HLCS
Biotin---protein ligase.
  
 
 0.673
DCAKD
Dephospho-CoA kinase domain-containing protein.
  
 0.662
PPCDC
Phosphopantothenoylcysteine decarboxylase isoform X1.
    
 0.657
COX19
Cytochrome c oxidase assembly protein subunit 19.
    
 0.652
WDR64
WD repeat-containing protein 64 isoform X1.
      
 0.533
GAS8
Growth arrest-specific protein 8.
     
 0.428
PANK3
Pantothenate kinase 3 isoform X1.
     
 0.428
PANK1
Pantothenate kinase 1 isoform X1.
     
 0.428
PANK2
Mitochondrial antiviral-signaling protein.
     
 0.428
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.