Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL1 | NEUROG1 | ENSPMJP00000011468 | ENSPMJP00000012515 | Achaete-scute complex protein. | Neurogenin 1. | 0.520 |
ASCL1 | PAX6 | ENSPMJP00000011468 | ENSPMJP00000002570 | Achaete-scute complex protein. | Paired box protein Pax-6 isoform X1. | 0.463 |
ENSPMJP00000004202 | INSM1 | ENSPMJP00000004202 | ENSPMJP00000018062 | Paired box protein Pax-4-like. | Insulinoma-associated protein 1. | 0.486 |
ENSPMJP00000004202 | NEUROG1 | ENSPMJP00000004202 | ENSPMJP00000012515 | Paired box protein Pax-4-like. | Neurogenin 1. | 0.496 |
INSM1 | ENSPMJP00000004202 | ENSPMJP00000018062 | ENSPMJP00000004202 | Insulinoma-associated protein 1. | Paired box protein Pax-4-like. | 0.486 |
INSM1 | NEUROG1 | ENSPMJP00000018062 | ENSPMJP00000012515 | Insulinoma-associated protein 1. | Neurogenin 1. | 0.596 |
NEUROG1 | ASCL1 | ENSPMJP00000012515 | ENSPMJP00000011468 | Neurogenin 1. | Achaete-scute complex protein. | 0.520 |
NEUROG1 | ENSPMJP00000004202 | ENSPMJP00000012515 | ENSPMJP00000004202 | Neurogenin 1. | Paired box protein Pax-4-like. | 0.496 |
NEUROG1 | INSM1 | ENSPMJP00000012515 | ENSPMJP00000018062 | Neurogenin 1. | Insulinoma-associated protein 1. | 0.596 |
NEUROG1 | PAX6 | ENSPMJP00000012515 | ENSPMJP00000002570 | Neurogenin 1. | Paired box protein Pax-6 isoform X1. | 0.452 |
PAX6 | ASCL1 | ENSPMJP00000002570 | ENSPMJP00000011468 | Paired box protein Pax-6 isoform X1. | Achaete-scute complex protein. | 0.463 |
PAX6 | NEUROG1 | ENSPMJP00000002570 | ENSPMJP00000012515 | Paired box protein Pax-6 isoform X1. | Neurogenin 1. | 0.452 |