Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP3 | DCX | ENSPMJP00000002588 | ENSPMJP00000016095 | Caspase 3. | Neuronal migration protein doublecortin isoform X1. | 0.405 |
CASP3 | ENSPMJP00000012921 | ENSPMJP00000002588 | ENSPMJP00000012921 | Caspase 3. | annotation not available | 0.557 |
CASP3 | FOXG1 | ENSPMJP00000002588 | ENSPMJP00000022430 | Caspase 3. | Forkhead box protein G1. | 0.429 |
CASP3 | GFAP | ENSPMJP00000002588 | ENSPMJP00000003656 | Caspase 3. | Glial fibrillary acidic protein isoform X1. | 0.710 |
CASP3 | TBR1 | ENSPMJP00000002588 | ENSPMJP00000026941 | Caspase 3. | T-box brain transcription factor 1. | 0.528 |
DCX | CASP3 | ENSPMJP00000016095 | ENSPMJP00000002588 | Neuronal migration protein doublecortin isoform X1. | Caspase 3. | 0.405 |
DCX | ENSPMJP00000012921 | ENSPMJP00000016095 | ENSPMJP00000012921 | Neuronal migration protein doublecortin isoform X1. | annotation not available | 0.548 |
DCX | GFAP | ENSPMJP00000016095 | ENSPMJP00000003656 | Neuronal migration protein doublecortin isoform X1. | Glial fibrillary acidic protein isoform X1. | 0.625 |
DCX | PVALB | ENSPMJP00000016095 | ENSPMJP00000010119 | Neuronal migration protein doublecortin isoform X1. | Parvalbumin alpha. | 0.560 |
DCX | RBFOX3 | ENSPMJP00000016095 | ENSPMJP00000022457 | Neuronal migration protein doublecortin isoform X1. | RNA binding fox-1 homolog 3. | 0.533 |
ENSPMJP00000012921 | CASP3 | ENSPMJP00000012921 | ENSPMJP00000002588 | annotation not available | Caspase 3. | 0.557 |
ENSPMJP00000012921 | DCX | ENSPMJP00000012921 | ENSPMJP00000016095 | annotation not available | Neuronal migration protein doublecortin isoform X1. | 0.548 |
ENSPMJP00000012921 | FOXG1 | ENSPMJP00000012921 | ENSPMJP00000022430 | annotation not available | Forkhead box protein G1. | 0.543 |
ENSPMJP00000012921 | GFAP | ENSPMJP00000012921 | ENSPMJP00000003656 | annotation not available | Glial fibrillary acidic protein isoform X1. | 0.644 |
ENSPMJP00000012921 | NOTCH1 | ENSPMJP00000012921 | ENSPMJP00000007760 | annotation not available | Neurogenic locus notch homolog protein 1 isoform X1. | 0.559 |
ENSPMJP00000012921 | PDGFRA | ENSPMJP00000012921 | ENSPMJP00000007753 | annotation not available | Platelet-derived growth factor receptor alpha. | 0.541 |
ENSPMJP00000012921 | PVALB | ENSPMJP00000012921 | ENSPMJP00000010119 | annotation not available | Parvalbumin alpha. | 0.551 |
ENSPMJP00000012921 | RBFOX3 | ENSPMJP00000012921 | ENSPMJP00000022457 | annotation not available | RNA binding fox-1 homolog 3. | 0.545 |
ENSPMJP00000012921 | SYNM | ENSPMJP00000012921 | ENSPMJP00000012655 | annotation not available | Synemin isoform X1. | 0.567 |
ENSPMJP00000012921 | TBR1 | ENSPMJP00000012921 | ENSPMJP00000026941 | annotation not available | T-box brain transcription factor 1. | 0.547 |
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