STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD44CD44 antigen isoform X1. (705 aa)    
Predicted Functional Partners:
RDX
Radixin.
   
 
 0.929
COL2A1
Collagen alpha-1(II) chain isoform X1.
    
 0.920
COL1A1
Collagen alpha-1(I) chain.
    
 0.920
LAMC2
Laminin subunit gamma-2 isoform X1.
     
 0.917
LAMA2
Laminin subunit alpha-2 isoform X1.
    
 0.912
LAMA1
Laminin subunit alpha-1.
     
 0.911
COL6A3-2
Collagen alpha-3(VI) chain isoform X3.
    
 0.905
LAMC3
Laminin subunit gamma-3 isoform X1.
     
 0.905
SPP1
Secreted phosphoprotein 1.
   
 0.905
LAMC1
Laminin subunit gamma-1 isoform X1.
     
 0.905
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.