STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIMD1GTPase IMAP family member GIMD1. (220 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog isoform X1.
    
 0.759
RANBP2
E3 SUMO-protein ligase RanBP2 isoform X1.
    
 0.520
KDM6A
Lysine-specific demethylase 6A isoform X1.
    
 0.462
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
  0.440
RBBP5
Retinoblastoma-binding protein 5.
    
 0.402
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.