STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM46Probable RNA-binding protein 46. (509 aa)    
Predicted Functional Partners:
DMRTB1
Doublesex- and mab-3-related transcription factor B1.
      
 0.684
ZFYVE28
Lateral signaling target protein 2 homolog isoform X1.
      
 0.654
DAZL
Deleted in azoospermia-like isoform X1.
   
 0.646
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.602
EXD3
Exonuclease mut-7 homolog isoform X1.
      
 0.539
ARMC9
LisH domain-containing protein ARMC9 isoform X1.
      
 0.533
HSPBAP1
HSPB1-associated protein 1 isoform X1.
      
 0.525
SRSF3
Splicing factor, arginine/serine-rich 3.
   
 0.514
MEIOC
Meiosis-specific coiled-coil domain-containing protein MEIOC.
      
 0.505
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
   
 
 0.499
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.