STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP2Lysosome-associated membrane glycoprotein 2 isoform X1. (464 aa)    
Predicted Functional Partners:
LAMP1
Lysosome-associated membrane glycoprotein 1.
  
0.996
LAMP3
Lysosome-associated membrane glycoprotein 3.
     
0.901
MBP
Myelin basic protein isoform X1.
   
 
 0.694
SLIT3
Slit homolog 3 protein isoform X3.
      
 0.690
BECN1
Beclin-1.
      
 0.619
SNCA
Alpha-synuclein.
   
 
 0.567
SQSTM1
Sequestosome-1 isoform X1.
    
 
 0.544
FASTKD2
FAST kinase domain-containing protein 2, mitochondrial.
      
 0.533
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.524
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.521
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.