STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC6Structural maintenance of chromosomes protein 6. (1083 aa)    
Predicted Functional Partners:
SMC5
Structural maintenance of chromosomes protein 5 isoform X1.
   
0.999
NSMCE1
Non-structural maintenance of chromosomes element 1 homolog isoform X1.
    
 0.998
NSMCE3
Non-structural maintenance of chromosomes element 3 homolog.
   
 0.998
NSMCE4A
Non-structural maintenance of chromosomes element 4 homolog A.
   
 0.998
NSMCE2
E3 SUMO-protein ligase NSE2 isoform X1.
    
 0.998
PAXIP1
PAX-interacting protein 1.
   
 
 0.955
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.931
RAD21L1
Double-strand-break repair protein rad21-like protein 1.
   
 0.868
RAD21
Double-strand-break repair protein rad21 homolog.
   
 0.868
PRAM1
PML-RARA-regulated adapter molecule 1 isoform X1.
   
 0.867
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.