STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCP2MRNA-decapping enzyme subunit 2. (382 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA-decapping protein 3.
  
 0.999
DDX6
DEAD-box helicase 6.
    
 0.990
EDC4
Enhancer of mRNA-decapping protein 4.
    
 0.990
XRN1
5'-3' exoribonuclease 1.
   
 0.985
CNOT7
CCR4-NOT transcription complex subunit 7/8.
    
 
 0.955
PATL1
DNA topoisomerase 2-associated protein PAT1.
    
 0.953
PATL2
DNA topoisomerase 2-associated protein PAT1.
    
 0.953
LSM1
U6 snRNA-associated Sm-like protein LSm1 isoform X1.
    
 0.940
DCP1B
MRNA-decapping enzyme 1B isoform X1.
    
 0.928
LSM4
U6 snRNA-associated Sm-like protein LSm4.
    
 0.926
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.