STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A1Solute carrier family 30 (zinc transporter), member 1. (514 aa)    
Predicted Functional Partners:
CXCL12
Stromal cell-derived factor 1.
      
 0.690
SLC30A6
Solute carrier family 30 (zinc transporter), member 6.
    
 
 0.631
SLC39A13
Solute carrier family 39 (zinc transporter), member 13.
   
 0.569
SLC30A9
Solute carrier family 30 (zinc transporter), member 9.
  
 
 0.564
SLC39A12
Solute carrier family 39 (zinc transporter), member 12.
  
 0.560
GOLT1B
Vesicle transport protein GOT1B isoform X1.
     
 0.536
SLC35B3
Solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3.
  
 
 0.534
SLC31A1
Solute carrier family 31 (copper transporter), member 1.
      
 0.533
SLC39A9
Solute carrier family 39 (zinc transporter), member 9.
   
 
 0.532
TMEM144
Transmembrane protein 144 isoform X1.
   
  
 0.528
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.