STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (945 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.971
ENSPMJP00000017989
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.954
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3 isoform X1.
   
 0.943
RBMX
RNA-binding motif protein, X chromosome isoform X2.
   
 0.931
SRSF1
Splicing factor, arginine/serine-rich 1.
   
 0.655
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.615
YBX1
Nuclease-sensitive element-binding protein 1 isoform X1.
   
 0.609
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.602
ENSPMJP00000004753
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.602
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.586
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.