STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALYREFTHO complex subunit 4. (254 aa)    
Predicted Functional Partners:
THOC2
THO complex subunit 2 isoform X1.
   
 0.998
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.994
THOC1
THO complex subunit 1 isoform X1.
    
 0.993
THOC5
THO complex subunit 5 homolog isoform X1.
   
 0.993
THOC3
THO complex subunit 3.
   
 0.992
SAP18
Histone deacetylase complex subunit SAP18.
   
 
 0.975
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.969
UPF1
UPF1 RNA helicase and ATPase.
   
 
 0.969
ENSPMJP00000005498
annotation not available
   
 0.964
RNPS1
RNA-binding protein with serine-rich domain 1 isoform X1.
   
 0.953
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.