STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAI2Zinc finger protein SNAI2. (268 aa)    
Predicted Functional Partners:
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
    
 0.746
RCOR1
REST corepressor 1.
    
 0.657
KPNB1
Importin subunit beta-1 isoform X1.
    
   0.631
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 
 0.627
GSK3B
Glycogen synthase kinase-3 beta isoform X1.
   
 
 0.549
NRG4
Pro-neuregulin-4, membrane-bound isoform isoform X1.
      
 0.533
CTNNB1
Catenin beta-1 isoform X1.
      
 0.526
NFATC1
Nuclear factor of activated T-cells, cytoplasmic 1 isoform X1.
      
 0.526
TWIST1
Twist family bHLH transcription factor 1.
   
  
 0.499
HMG20A
High mobility group protein 20A.
    
 
 0.483
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.