STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPHAspartyl/asparaginyl beta-hydroxylase isoform X3. (358 aa)    
Predicted Functional Partners:
CASQ2
Calsequestrin 2.
   
 
 0.941
RYR2
Ryanodine receptor 2 isoform X4.
   
 
 0.890
RYR3
Ryanodine receptor 3 isoform X1.
   
 
 0.890
ENSPMJP00000021200
annotation not available
 
      0.538
NEFL
Neurofilament light polypeptide.
   
 
 0.461
NEFM
Neurofilament medium polypeptide (neurofilament 3).
   
 
 0.461
ENSPMJP00000025831
annotation not available
   
 
 0.461
FKBP1A
Peptidyl-prolyl cis-trans isomerase FKBP1A.
     
 0.406
FKBP1B
Peptidyl-prolyl cis-trans isomerase FKBP1B isoform X1.
     
 0.406
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.