STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM189A1Protein FAM189A1 isoform X1. (634 aa)    
Predicted Functional Partners:
GDI2
Rab GDP dissociation inhibitor beta.
   
 0.587
RAB3IL1
Guanine nucleotide exchange factor for Rab-3A isoform X2.
    
 0.518
RAB3IP
Rab-3A-interacting protein isoform X1.
    
 0.518
EXOC4
Exocyst complex component 4.
    
 0.509
EXOC1
Exocyst complex component 1 isoform X1.
    
 0.497
EXOC2
Exocyst complex component 2.
    
 0.489
EXOC7
Exocyst complex component 7 isoform X1.
    
 0.473
CHM
Rab proteins geranylgeranyltransferase component A 1 isoform X1.
    
 0.471
EXOC5
Exocyst complex component 5 isoform X1.
    
 0.452
MON1A
Vacuolar fusion protein MON1 homolog A isoform X1.
    
 0.444
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.