STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRA2Ankyrin repeat family A protein 2. (313 aa)    
Predicted Functional Partners:
RFX7
DNA-binding protein RFX7 isoform X1.
    
 
 0.865
RFXAP
Regulatory factor X-associated protein.
    
 
 0.621
LOC107202733
Low-density lipoprotein receptor-related protein 1-like.
    
 0.612
LRP4
LDL receptor related protein 4.
    
 0.612
LRP2
Low-density lipoprotein receptor-related protein 2 isoform X1.
    
 0.612
ANKRD49
Ankyrin repeat domain-containing protein 49.
  
    0.539
ENSPMJP00000005482
annotation not available
  
     0.501
ENSPMJP00000017938
annotation not available
  
     0.499
NFKBIA
NF-kappa-B inhibitor alpha.
  
     0.499
CDKN2C
Cyclin-dependent kinase 4 inhibitor C.
  
     0.492
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.