STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIREAutoimmune regulator isoform X1. (477 aa)    
Predicted Functional Partners:
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.848
MBD3
Methyl-CpG-binding domain protein 3 isoform X1.
    
 0.842
RBBP4
Histone-binding protein RBBP4.
   
 0.771
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.771
KDM1A
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase.
   
 0.736
ENSPMJP00000022706
annotation not available
    
 0.734
ARID4A
AT-rich interaction domain 4A.
    
 0.727
ARID4B
AT-rich interactive domain-containing protein 4B isoform X2.
    
 0.727
RCOR3
REST corepressor 3 isoform X1.
    
 0.654
RCOR1
REST corepressor 1.
    
 0.654
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.