STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107206496Uncharacterized protein LOC107206496 isoform X1. (690 aa)    
Predicted Functional Partners:
EXOC4
Exocyst complex component 4.
   
 0.862
EXOC2
Exocyst complex component 2.
    
 0.862
EXOC1
Exocyst complex component 1 isoform X1.
    
 0.861
EXOC8
Exocyst complex component 8.
    
 0.859
EXOC7
Exocyst complex component 7 isoform X1.
   
 0.859
EXOC5
Exocyst complex component 5 isoform X1.
   
 0.851
EXOC1L
Uncharacterized protein LOC107202739.
    
 0.749
EXOC6
Exocyst complex component 6 isoform X1.
    
 0.632
ENSPMJP00000025491
annotation not available
    
 0.632
ENSPMJP00000025492
annotation not available
    
 0.632
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.