STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIFINGrifin. (136 aa)    
Predicted Functional Partners:
PLEKHG3
Pleckstrin homology and RhoGEF domain containing G3.
      
 0.546
CRYBA4
Beta-crystallin A4.
      
 0.546
LRIT2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
      
 0.521
PTRH1
Probable peptidyl-tRNA hydrolase isoform X1.
      
 0.501
CRYBA1
LOW QUALITY PROTEIN: beta-crystallin A3.
   
  
 0.448
FAM169A
Soluble lamin-associated protein of 75 kDa isoform X1.
      
 0.426
ENSPMJP00000024368
annotation not available
      
 0.426
RNF10
RING finger protein 10 isoform X1.
      
 0.426
CRYBA2
Beta-crystallin A2.
   
 
 0.410
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.