Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX58 | DHX58 | ENSPMJP00000004894 | ENSPMJP00000001323 | Probable ATP-dependent RNA helicase DDX58 isoform X1. | Probable ATP-dependent RNA helicase DHX58. | 0.983 |
DDX58 | EIF2AK2 | ENSPMJP00000004894 | ENSPMJP00000020362 | Probable ATP-dependent RNA helicase DDX58 isoform X1. | Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. | 0.885 |
DDX58 | RPS27A | ENSPMJP00000004894 | ENSPMJP00000019221 | Probable ATP-dependent RNA helicase DDX58 isoform X1. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.894 |
DDX58 | TRIM25 | ENSPMJP00000004894 | ENSPMJP00000024625 | Probable ATP-dependent RNA helicase DDX58 isoform X1. | Tripartite motif containing 25. | 0.614 |
DDX58 | UBA52 | ENSPMJP00000004894 | ENSPMJP00000015421 | Probable ATP-dependent RNA helicase DDX58 isoform X1. | Ubiquitin-large subunit ribosomal protein L40e. | 0.785 |
DHX58 | DDX58 | ENSPMJP00000001323 | ENSPMJP00000004894 | Probable ATP-dependent RNA helicase DHX58. | Probable ATP-dependent RNA helicase DDX58 isoform X1. | 0.983 |
DHX58 | EIF2AK2 | ENSPMJP00000001323 | ENSPMJP00000020362 | Probable ATP-dependent RNA helicase DHX58. | Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. | 0.608 |
DHX58 | RPS27A | ENSPMJP00000001323 | ENSPMJP00000019221 | Probable ATP-dependent RNA helicase DHX58. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.585 |
DHX58 | TRIM25 | ENSPMJP00000001323 | ENSPMJP00000024625 | Probable ATP-dependent RNA helicase DHX58. | Tripartite motif containing 25. | 0.476 |
DHX58 | UBA52 | ENSPMJP00000001323 | ENSPMJP00000015421 | Probable ATP-dependent RNA helicase DHX58. | Ubiquitin-large subunit ribosomal protein L40e. | 0.518 |
EIF2AK2 | DDX58 | ENSPMJP00000020362 | ENSPMJP00000004894 | Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. | Probable ATP-dependent RNA helicase DDX58 isoform X1. | 0.885 |
EIF2AK2 | DHX58 | ENSPMJP00000020362 | ENSPMJP00000001323 | Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. | Probable ATP-dependent RNA helicase DHX58. | 0.608 |
EIF2AK2 | TRIM25 | ENSPMJP00000020362 | ENSPMJP00000024625 | Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. | Tripartite motif containing 25. | 0.594 |
EIF2AK2 | UBE2L6 | ENSPMJP00000020362 | ENSPMJP00000007922 | Interferon-induced, double-stranded RNA-activated protein kinase isoform X1. | Ubiquitin/ISG15-conjugating enzyme E2 L6. | 0.443 |
LIPT1 | PTTG1 | ENSPMJP00000020464 | ENSPMJP00000019302 | Lipoyltransferase 1, mitochondrial. | Securin. | 0.538 |
LIPT1 | TRIM25 | ENSPMJP00000020464 | ENSPMJP00000024625 | Lipoyltransferase 1, mitochondrial. | Tripartite motif containing 25. | 0.538 |
LIPT1 | TSPAN2 | ENSPMJP00000020464 | ENSPMJP00000015802 | Lipoyltransferase 1, mitochondrial. | Tetraspanin-2. | 0.538 |
PTTG1 | LIPT1 | ENSPMJP00000019302 | ENSPMJP00000020464 | Securin. | Lipoyltransferase 1, mitochondrial. | 0.538 |
PTTG1 | RPS27A | ENSPMJP00000019302 | ENSPMJP00000019221 | Securin. | Ubiquitin-small subunit ribosomal protein S27Ae. | 0.588 |
PTTG1 | TRIM25 | ENSPMJP00000019302 | ENSPMJP00000024625 | Securin. | Tripartite motif containing 25. | 0.552 |
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