STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCDC2Doublecortin domain-containing protein 2 isoform X1. (500 aa)    
Predicted Functional Partners:
POT1
Protection of telomeres protein 1 isoform X1.
    
 
 0.655
DNAAF4
Dyslexia susceptibility 1 candidate gene 1 protein isoform X1.
      
 0.631
NFASC
Neurofascin isoform X1.
    
 0.548
SHC3
SHC adaptor protein 3.
   
  
 0.541
MARK1
Serine/threonine-protein kinase MARK1 isoform X1.
      
 0.539
LRP8
Low-density lipoprotein receptor-related protein 8 isoform X1.
      
 0.533
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.533
MAP1B
Microtubule-associated protein 1B.
      
 0.533
IFT57
Intraflagellar transport protein 57 homolog.
      
 0.508
KIAA0319
Dyslexia-associated protein KIAA0319 homolog isoform X1.
    
 
 0.477
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.