STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBOX5U-box domain-containing protein 5. (532 aa)    
Predicted Functional Partners:
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X1.
   
 0.919
UFD1
Ubiquitin fusion degradation protein 1 homolog isoform X1.
    
 
 0.763
YOD1
Ubiquitin thioesterase OTU1.
    
 
 0.753
RAD23A
UV excision repair protein RAD23 homolog A.
   
 0.658
RAD23B
UV excision repair protein RAD23 homolog B isoform X1.
   
 0.658
FAAP100
Fanconi anemia core complex-associated protein 100.
    
 
 0.651
NPLOC4
Nuclear protein localization protein 4 homolog.
    
 
 0.651
ENSPMJP00000008356
annotation not available
   
 0.643
UBQLN4
Ubiquilin 4.
   
 0.612
UBQLN1
Ubiquilin-1 isoform X1.
   
 0.612
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.