STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC31Tetratricopeptide repeat protein 31 isoform X2. (672 aa)    
Predicted Functional Partners:
AUP1
Ancient ubiquitous protein 1 isoform X1.
   
  
 0.532
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.510
DDX54
ATP-dependent RNA helicase DDX54/DBP10.
   
 0.499
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.492
DHX32
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32.
   
 0.478
DQX1
ATP-dependent RNA helicase DQX1 isoform X1.
   
 0.478
WDR11
WD repeat-containing protein 11 isoform X1.
      
 0.461
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.451
SRSF2
Splicing factor, arginine/serine-rich 2.
    
 0.442
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.441
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.