STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRDTBromodomain testis-specific protein isoform X1. (1014 aa)    
Predicted Functional Partners:
TAF7
Transcription initiation factor TFIID subunit 7-like.
    
 
 0.829
DMAP1
DNA methyltransferase 1-associated protein 1.
    
 
 0.677
ENSPMJP00000002660
annotation not available
    
 
 0.676
ENSPMJP00000002721
annotation not available
    
 
 0.676
E2F1
Peroxisomal membrane protein 4 isoform X2.
    
 
 0.660
TAF1
Transcription initiation factor TFIID subunit 1 isoform X1.
    
 
0.638
CDK9
Cyclin-dependent kinase 9 isoform X1.
   
 
 0.628
NSD3
Histone-lysine N-methyltransferase NSD3 isoform X1.
   
 
 0.613
ENSPMJP00000002695
annotation not available
    
 
 0.611
JMJD6
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6.
    
 
 0.610
Your Current Organism:
Parus major
NCBI taxonomy Id: 9157
Other names: Great Tit, Kohlmeise, P. major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.