Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL4 | BHLHA9 | ENSPMJP00000010708 | ENSPMJP00000026989 | Achaete-scute family bHLH transcription factor 4. | Class A basic helix-loop-helix protein 9. | 0.533 |
ASCL4 | BHLHE23 | ENSPMJP00000010708 | ENSPMJP00000009146 | Achaete-scute family bHLH transcription factor 4. | Class B basic helix-loop-helix protein 4/5. | 0.545 |
BHLHA9 | ASCL4 | ENSPMJP00000026989 | ENSPMJP00000010708 | Class A basic helix-loop-helix protein 9. | Achaete-scute family bHLH transcription factor 4. | 0.533 |
BHLHA9 | BHLHE23 | ENSPMJP00000026989 | ENSPMJP00000009146 | Class A basic helix-loop-helix protein 9. | Class B basic helix-loop-helix protein 4/5. | 0.533 |
BHLHA9 | RD3L | ENSPMJP00000026989 | ENSPMJP00000000812 | Class A basic helix-loop-helix protein 9. | Protein RD3-like. | 0.525 |
BHLHA9 | YWHAE | ENSPMJP00000026989 | ENSPMJP00000026011 | Class A basic helix-loop-helix protein 9. | 14-3-3 protein epsilon isoform X1. | 0.432 |
BHLHE23 | ASCL4 | ENSPMJP00000009146 | ENSPMJP00000010708 | Class B basic helix-loop-helix protein 4/5. | Achaete-scute family bHLH transcription factor 4. | 0.545 |
BHLHE23 | BHLHA9 | ENSPMJP00000009146 | ENSPMJP00000026989 | Class B basic helix-loop-helix protein 4/5. | Class A basic helix-loop-helix protein 9. | 0.533 |
RD3L | BHLHA9 | ENSPMJP00000000812 | ENSPMJP00000026989 | Protein RD3-like. | Class A basic helix-loop-helix protein 9. | 0.525 |
YWHAE | BHLHA9 | ENSPMJP00000026011 | ENSPMJP00000026989 | 14-3-3 protein epsilon isoform X1. | Class A basic helix-loop-helix protein 9. | 0.432 |