STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDHypothetical protein; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (121 aa)    
Predicted Functional Partners:
AIK97243.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.831
AIK95768.1
Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.827
purA
Hypothetical protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.812
AIK97244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.801
AIK97107.1
Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
AIK97269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.564
AIK97246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
AIK95623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.446
AIK96227.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.446
AIK96824.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.446
Your Current Organism:
Paracaedibacter acanthamoebae
NCBI taxonomy Id: 91604
Other names: C. Paracaedibacter acanthamoebae, Candidatus Paracaedibacter acanthamoebae, endosymbiont of Acanthamoeba sp. UWC9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.