STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9LUW8RRM domain-containing protein. (244 aa)    
Predicted Functional Partners:
A0A0C9M4D4
AlteRNAtive splicing factor SRp20/9G8.
   
 0.906
A0A0C9MZB4
Arginine/serine-rich splicing factor.
   
0.906
A0A0C9N5Q0
Uncharacterized protein.
   
 0.891
A0A0C9N952
Uncharacterized protein.
   
 0.891
A0A0C9MGM0
RRM domain-containing protein.
    
0.849
A0A0C9MZ65
Nuclear cap-binding protein subunit 2.
   
 0.800
A0A0C9LXF2
RRM domain-containing protein.
  
 
0.795
A0A0C9M390
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.792
A0A0C9MVF4
RNA-binding domain-containing protein.
  
 0.790
A0A0C9MXB0
Small nuclear ribonucleoprotein F-like.
   
 0.786
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
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