STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9M924Ubiquitin carboxyl-terminal hydrolase. (914 aa)    
Predicted Functional Partners:
A0A0C9LQV9
Ubiquitin.
   
 0.937
A0A0C9MLE7
Signal transducing adaptor molecule.
    
 0.846
A0A0C9M1Z1
Ubiquitin domain containing protein.
   
 0.819
A0A0C9N7A5
Polyubiquitin.
   
 0.819
A0A0C9LZZ1
Ubiquitin-40S ribosomal protein S27a-like.
    
 0.802
A0A0C9MPC8
Ubiquitin-domain-containing protein.
    
 0.802
A0A0C9MJN6
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.793
A0A0C9N4H5
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.793
A0A0C9ML83
Ribosomal_L40e domain-containing protein.
   
 0.782
A0A0C9MNN1
Uncharacterized protein.
   
 0.782
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
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