STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9MEX8Small GTP-binding protein. (779 aa)    
Predicted Functional Partners:
A0A0C9LSR4
Small nuclear ribonucleoprotein Sm D3.
    
 0.786
A0A0C9MVK3
Small nuclear ribonucleoprotein Sm D2.
    
 0.783
A0A0C9LUT0
Likely translation elongation factor EF-1gamma.
    
  0.775
A0A0C9M8N3
Uncharacterized protein.
    
 0.768
A0A0C9MXB0
Small nuclear ribonucleoprotein F-like.
    
  0.767
A0A0C9M390
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.765
A0A0C9MZ56
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.751
A0A0C9MGT8
Uncharacterized protein.
    
  0.744
A0A0C9MHB8
RNA-binding domain-containing protein.
    
 0.736
A0A0C9MRI5
RNA-binding protein 40-like.
    
 0.736
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
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