Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0C9LRQ6 | A0A0C9M2X8 | Amidohydrolase. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.646 |
A0A0C9LRQ6 | A0A0C9MHM0 | Amidohydrolase. | NAD-P-binding protein. | 0.808 |
A0A0C9LS22 | A0A0C9M2X8 | Ferredoxin. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.754 |
A0A0C9LS22 | A0A0C9M9B2 | Ferredoxin. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.501 |
A0A0C9LS22 | A0A0C9MG90 | Ferredoxin. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.501 |
A0A0C9LS22 | A0A0C9MHM0 | Ferredoxin. | NAD-P-binding protein. | 0.767 |
A0A0C9LS22 | A0A0C9MJM0 | Ferredoxin. | S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.818 |
A0A0C9M2X8 | A0A0C9LRQ6 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Amidohydrolase. | 0.646 |
A0A0C9M2X8 | A0A0C9LS22 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Ferredoxin. | 0.754 |
A0A0C9M2X8 | A0A0C9M9B2 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.758 |
A0A0C9M2X8 | A0A0C9MEQ2 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase. | 0.785 |
A0A0C9M2X8 | A0A0C9MG90 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | 0.758 |
A0A0C9M2X8 | A0A0C9MHM0 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NAD-P-binding protein. | 0.778 |
A0A0C9M2X8 | A0A0C9MJM0 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.582 |
A0A0C9M2X8 | A0A0C9MQL7 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.898 |
A0A0C9M2X8 | A0A0C9N6A3 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | ACP S-malonyltransferase. | 0.904 |
A0A0C9M4Y3 | A0A0C9MHM0 | Phytoene dehydrogenase-like. | NAD-P-binding protein. | 0.765 |
A0A0C9M4Y3 | A0A0C9MJM0 | Phytoene dehydrogenase-like. | S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.784 |
A0A0C9M9B2 | A0A0C9LS22 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Ferredoxin. | 0.501 |
A0A0C9M9B2 | A0A0C9M2X8 | Dihydrofolate reductase; Belongs to the dihydrofolate reductase family. | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.758 |
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