STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9MIA2Integrase catalytic domain-containing protein. (236 aa)    
Predicted Functional Partners:
A0A0C9M5P5
Helicase C-terminal domain-containing protein.
    
 0.952
A0A0C9MIX7
CENP-T_C domain-containing protein.
    
  0.702
A0A0C9MRP3
Histone-binding protein Caf1-like.
    
 0.665
A0A0C9MUL7
Histone-binding protein RBBP4-like.
    
 0.665
A0A0C9M7N9
Single-stranded DNA binding protein Ssb2.
    
 0.659
A0A0C9MUB5
Replication protein A 32 kDa subunit isoform X2.
    
 0.659
A0A0C9M8X7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.645
A0A0C9MK07
CST complex subunit STN1.
    
  0.638
A0A0C9MPG1
Uncharacterized protein.
    
  0.637
A0A0C9LPT3
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.631
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
Server load: low (16%) [HD]