STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9MKZ0Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
A0A0C9MVK3
Small nuclear ribonucleoprotein Sm D2.
   
 0.840
A0A0C9MR28
Fip1 domain-containing protein.
   
 0.839
A0A0C9LSR4
Small nuclear ribonucleoprotein Sm D3.
   
 0.837
A0A0C9MXB0
Small nuclear ribonucleoprotein F-like.
   
 0.835
A0A0C9MVF4
RNA-binding domain-containing protein.
   
 0.833
A0A0C9MSZ9
DUF3453 domain-containing protein.
    
 0.826
A0A0C9M390
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.825
A0A0C9LSJ6
Cleavage and polyadenylation specificity factor subunit 1 isoform X1.
   
 0.818
A0A0C9LYA4
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.817
A0A0C9LXF2
RRM domain-containing protein.
   
 0.816
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.