STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9MNC7Exosome complex exonuclease rrp4. (297 aa)    
Predicted Functional Partners:
A0A0C9LQ80
Exosome component 4.
   
 0.999
A0A0C9M0C9
Ribosomal protein S5 domain 2-like protein.
   
 0.999
A0A0C9MH95
Exosome complex component RRP42-like.
   
 0.999
A0A0C9MHH5
Exosome complex exonuclease RRP40.
   
 0.999
A0A0C9MJS0
Exosome complex component RRP43.
   
 0.999
A0A0C9N0K1
Exosome complex component CSL4-like.
   
 0.999
A0A0C9N276
Exosome complex component RRP45-like.
   
 0.999
A0A0C9LPL5
Nuclear nucleic acid-binding protein C1D-like.
   
 0.998
A0A0C9MTW2
ATP dependent RNA helicase.
   
 0.997
A0A0C9MRF2
HBS1-like protein-like.
    
 0.988
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
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