STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9MX53DCP2-domain-containing protein. (444 aa)    
Predicted Functional Partners:
A0A0C9N228
Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor.
    
 0.996
A0A0C9N4T9
Uncharacterized protein.
    
 0.991
A0A0C9M0X9
YjeF_N domain protein.
  
 0.977
A0A0C9MMS1
YjeF N-terminal domain-containing protein.
  
 0.977
LSM1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
    
 0.946
A0A0C9LPN7
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.913
A0A0C9M485
Eukaryotic translation initiation factor 4A-like protein; Belongs to the DEAD box helicase family.
   
 0.913
A0A0C9M7F1
Exonuclease Kem1; Belongs to the aldehyde dehydrogenase family.
   
 0.912
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.896
A0A0C9MH76
Tubulin tyrosine ligase.
    
 
 0.884
Your Current Organism:
Mucor ambiguus
NCBI taxonomy Id: 91626
Other names: M. ambiguus
Server load: low (16%) [HD]