Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES68464.1 | SES70093.1 | SAMN05216326_1021 | SAMN05216326_10269 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.640 |
SES68464.1 | SET16905.1 | SAMN05216326_1021 | SAMN05216326_11417 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | FecR family protein. | 0.769 |
SES68464.1 | rpoA | SAMN05216326_1021 | SAMN05216326_13128 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.571 |
SES68464.1 | rpoB | SAMN05216326_1021 | SAMN05216326_1499 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.406 |
SES70093.1 | SES68464.1 | SAMN05216326_10269 | SAMN05216326_1021 | RNA polymerase sigma-70 factor, ECF subfamily. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.640 |
SES70093.1 | SES70122.1 | SAMN05216326_10269 | SAMN05216326_10270 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.967 |
SES70093.1 | SES70416.1 | SAMN05216326_10269 | SAMN05216326_10280 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.878 |
SES70093.1 | SES70440.1 | SAMN05216326_10269 | SAMN05216326_10281 | RNA polymerase sigma-70 factor, ECF subfamily. | Iron complex outermembrane recepter protein. | 0.649 |
SES70093.1 | SES84764.1 | SAMN05216326_10269 | SAMN05216326_10539 | RNA polymerase sigma-70 factor, ECF subfamily. | sigma-E factor negative regulatory protein RseA. | 0.970 |
SES70093.1 | SET16905.1 | SAMN05216326_10269 | SAMN05216326_11417 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.590 |
SES70093.1 | rpoA | SAMN05216326_10269 | SAMN05216326_13128 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.777 |
SES70093.1 | rpoB | SAMN05216326_10269 | SAMN05216326_1499 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.949 |
SES70093.1 | rpoC | SAMN05216326_10269 | SAMN05216326_14910 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.950 |
SES70093.1 | rpoZ | SAMN05216326_10269 | SAMN05216326_14110 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.776 |
SES70122.1 | SES70093.1 | SAMN05216326_10270 | SAMN05216326_10269 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.967 |
SES70122.1 | SES70440.1 | SAMN05216326_10270 | SAMN05216326_10281 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.736 |
SES70416.1 | SES70093.1 | SAMN05216326_10280 | SAMN05216326_10269 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.878 |
SES70416.1 | SES70440.1 | SAMN05216326_10280 | SAMN05216326_10281 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.876 |
SES70440.1 | SES70093.1 | SAMN05216326_10281 | SAMN05216326_10269 | Iron complex outermembrane recepter protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.649 |
SES70440.1 | SES70122.1 | SAMN05216326_10281 | SAMN05216326_10270 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.736 |
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