STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES76908.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (387 aa)    
Predicted Functional Partners:
SES76834.1
Putative ABC transport system permease protein.
 
  
 0.975
SES76862.1
Putative ABC transport system permease protein.
 
  
 0.975
SES76891.1
Putative ABC transport system ATP-binding protein.
 
 
 0.957
SET17572.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
  
 0.903
SET01303.1
Putative ABC transport system permease protein.
 
  
 0.841
SET01333.1
Putative ABC transport system ATP-binding protein.
 
 
 0.711
SET36943.1
Outer membrane protein TolC.
 
 0.680
SES64173.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.640
SES76935.1
MutS domain III.
       0.621
SET03666.1
Outer membrane protein.
  
 0.606
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.