STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES74869.1Hypothetical protein. (424 aa)    
Predicted Functional Partners:
SES74894.1
Phospholipid-binding lipoprotein MlaA.
    0.843
SET01154.1
Outer membrane protein (porin).
    
 
 0.585
SET17406.1
Outer membrane protein (porin).
    
 
 0.585
SES74813.1
Proteic killer suppression protein.
 
     0.478
SES74839.1
Plasmid maintenance system antidote protein, XRE family.
 
     0.460
SET38550.1
Phospholipid transport system substrate-binding protein.
 
 
 
 0.451
SET00070.1
Hypothetical protein.
    
   0.440
SET20891.1
Hypothetical protein.
    
   0.440
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.