STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES90369.1CRISPR-associated exonuclease, Cas4 family. (209 aa)    
Predicted Functional Partners:
SES90337.1
CRISPR-associated protein, Cas1 family.
 
 
 0.999
SES90308.1
CRISPR-associated protein, Cas2 family.
 
 
 
 0.998
SET63053.1
CRISPR-associated endonuclease Cas2.
 
 
 
 0.985
SET63014.1
CRISPR-associated protein, Cas2 family.
 
 
 
 0.978
SET63032.1
CRISP-associated protein Cas1.
 
 
 0.976
SES90476.1
CRISPR-associated helicase, Cas3 family.
 
  
 0.856
SES90399.1
CRISPR-associated protein, Csd2 family.
   
 0.847
SES90452.1
CRISPR-associated protein, Cas5d family.
 
   
 0.818
SES90426.1
CRISPR-associated protein, Csd1 family.
 
     0.810
SES90284.1
Hypothetical protein.
       0.773
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.